Download e-book for kindle: Bioinformatics Research and Applications: 5th International by Mikhail S. Gelfand, Alexei E. Kazakov (auth.), Ion Măndoiu,

By Mikhail S. Gelfand, Alexei E. Kazakov (auth.), Ion Măndoiu, Giri Narasimhan, Yanqing Zhang (eds.)

ISBN-10: 3642015506

ISBN-13: 9783642015502

ISBN-10: 3642015514

ISBN-13: 9783642015519

This ebook constitutes the refereed complaints of the fifth foreign Symposium on Bioinformatics study and functions, ISBRA 2009, held in fortress Lauderdale, FL, united states, in could 2009.

The 26 revised complete papers provided jointly 4 invited papers have been rigorously reviewed and chosen from a complete of fifty five submissions. The papers conceal quite a lot of subject matters, together with clustering and category, gene expression research, gene networks, genome research, motif discovering, pathways, protein constitution prediction, protein area interactions, phylogenetics, and software program tools.

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Read Online or Download Bioinformatics Research and Applications: 5th International Symposium, ISBRA 2009 Fort Lauderdale, FL, USA, May 13-16, 2009 Proceedings PDF

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Additional info for Bioinformatics Research and Applications: 5th International Symposium, ISBRA 2009 Fort Lauderdale, FL, USA, May 13-16, 2009 Proceedings

Example text

Nature Genetics 34, 267–273 (2003) Integrating Multiple-Platform Expression Data through Gene Set Features 17 12. : Invited keynote talk: Set-level analyses for genome-wide association data. , Zelikovsky, A. ) ISBRA 2008. LNCS (LNBI), vol. 4983, p. 1. Springer, Heidelberg (2008) 13. : Co-regulation of metabolic genes is better explained by flux coupling than by network distance. PLOS Computational Biology 4(1) (2008) 14. : Gene expression omnibus: NCBI gene expression and hybridization array data repository.

Theorem. Let n × m matrix A be a bicluster (I, J). Then, A has a zero H-value if and only if A can be represented as a sum of n-vector X and m-vector Y in the following way aij = xi + yj , i ∈ I, j ∈ J. Proof. First, we assume that A is a n × m bicluster (I, J) with zero H value and try to prove that A can be represented as above-mentioned sum. Zero H value means zero residues rij , i ∈ I, j ∈ J. Then each element of A can be calculated as follows aij = aiJ + aI j − aI J . Denoting X = {xi = aiJ − aI2J }i∈I and Y = {yj = aI j − aI2J }j∈J results in A = X + Y where vector addition is defined as aij = xi + yj .

References 1. : Comparative microarray analysis. OMICS: A Journal of Integrative Biology 10(3), 381–397 (2006) 2. : Microarray data quality – review of current developments. OMICS: A Journal of Integrative Biology 11(1), 1–13 (2007) 3. : Assessing quality of hybridized RNA in Affymetrix GeneChip experiments using mixed-effects models. Biostatistics 7(2), 198–212 (2006) 4. : Quality assessment of microarrays: visualization of spatial artifacts and quantitation of regional biases. BMC Bioinformatics 6, 166 (2005) 5.

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Bioinformatics Research and Applications: 5th International Symposium, ISBRA 2009 Fort Lauderdale, FL, USA, May 13-16, 2009 Proceedings by Mikhail S. Gelfand, Alexei E. Kazakov (auth.), Ion Măndoiu, Giri Narasimhan, Yanqing Zhang (eds.)


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